RNA sequence analysis landscape: A comprehensive review of task types, databases, datasets, word embedding methods, and language modelsMuhammad Nabeel Asim; Muhammad Ali Ibrahim; Tayyaba Asif; Andreas DengelIn: Heliyon, Vol. 11, Pages 1-72, Elsevier, 1/2025.
Generative language models potential for requirement engineering applications: insights into current strengths and limitationsSummra Saleem; Muhammad Nabeel Asim; Ludger van Elst; Andreas DengelIn: Complex & Intelligent Systems, Vol. 11, No. 6, Pages 1-22, Springer, 2025.
CAPTURE: Comprehensive anti-cancer peptide predictor with a unique amino acid sequence encoderHina Ghafoor; Muhammad Nabeel Asim; Muhammad Ali Ibrahim; Sheraz Ahmed; Andreas DengelIn: Computers in Biology and Medicine - An International Journal, Vol. 176, Page 108538, Elsevier, 6/2024.